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bio-vcf-manipulation

separate

Merge, concatenate, sort, intersect, and subset VCF files using bcftools. Use when combining variant files, comparing call sets, or restructuring VCF data.

When to use

• combining variant files
• comparing call sets
• restructuring VCF data
• merging samples from multiple VCFs
• concatenating regions from multiple VCFs
• sorting unsorted VCF
• intersecting call sets
• extracting samples or regions

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