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bulk-trajblend-interpolation

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Extend scRNA-seq developmental trajectories with BulkTrajBlend by generating intermediate cells from bulk RNA-seq, training beta-VAE and GNN models, and interpolating missing states.

When to use

• bridge gaps in single-cell developmental trajectories
• deconvolve bulk samples
• identify overlapping communities with a GNN
• interpolate interrupted cell states
• train beta-VAE and GNN models
• generate synthetic cells
• analyse trajectories with pseudotime and PAGA

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