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bio-spatial-transcriptomics-spatial-communication

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Analyze cell-cell communication in spatial transcriptomics data using ligand-receptor analysis with Squidpy. Infer intercellular signaling, identify communication pathways, and visualize interaction networks. Use when analyzing cell-cell communication in spatial context.

When to use

• Analyze cell-cell communication in spatial context
• Identify significant ligand-receptor interactions
• Infer intercellular signaling
• Visualize interaction networks
• Filter significant interactions
• Create interaction heatmaps
• Network visualization

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