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bio-workflows-somatic-variant-pipeline

separate

End-to-end somatic variant calling from tumor-normal paired samples using Mutect2 or Strelka2. Covers preprocessing, variant calling, filtering, and annotation for cancer genomics.

When to use

• calling somatic mutations from tumor-normal pairs
• somatic variant calling
• cancer genomics
• Mutect2 workflow
• Strelka2 workflow
• variant filtering
• variant annotation

Skill page

Source