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bio-single-cell-cell-communication

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Infer cell-cell communication networks from scRNA-seq data using CellChat, NicheNet, and LIANA for ligand-receptor interaction analysis. Use when inferring ligand-receptor interactions between cell types.

When to use

• Infer cell-cell communication from scRNA-seq data
• Predict ligand-receptor interactions between cell types
• Visualize intercellular signaling networks
• Quantify intercellular communication networks
• Identify overexpressed ligands and receptors
• Compute communication probabilities
• Aggregate into pathway-level networks
• Compare signaling pathways between conditions

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