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data-io

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Read, write, create, and convert single-cell objects across AnnData (Python), Seurat (R), and SingleCellExperiment (R). Use when loading 10X Cell Ranger output (raw vs filtered), importing or exporting h5ad/RDS/h5mu/zarr, building AnnData or Seurat objects from matrices, moving objects between Python and R, or debugging lost layers, transposed matrices, or mangled gene names during conversion.

When to use

• loading 10X Cell Ranger output
• importing or exporting h5ad/RDS/h5mu/zarr
• building AnnData or Seurat objects from matrices
• moving objects between Python and R
• debugging lost layers, transposed matrices, or mangled gene names

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