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read-sequences

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Read biological sequence files (FASTA, FASTQ, GenBank, EMBL, ABI, SFF) with Biopython Bio.SeqIO, choosing between streaming, in-memory, and on-disk-indexed access. Use when parsing sequence files, iterating multi-record files, randomly accessing records by ID in large files, or maximizing parse throughput.

When to use

• parsing sequence files
• iterating multi-record files
• randomly accessing records by ID in large files
• maximizing parse throughput

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