domains / families / science / bio-reference-operations

bio-reference-operations

separate

Generate consensus sequences and manage reference files using samtools. Use when creating consensus from alignments, indexing references, or creating sequence dictionaries.

When to use

• creating consensus from alignments
• indexing references
• creating sequence dictionaries
• fetching regions from reference
• reverse complementing sequences
• generating consensus in FASTA or FASTQ format
• handling ambiguity in consensus

Skill page

Source