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bio-read-qc-quality-reports

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Generate and interpret quality reports from FASTQ files using FastQC and MultiQC. Assess per-base quality, adapter content, GC bias, duplication levels, and overrepresented sequences. Use when performing initial QC on raw sequencing data or validating preprocessing results.

When to use

• initial QC on raw sequencing data
• validating preprocessing results
• generating per-base quality plots
• assessing adapter content
• checking GC bias
• evaluating duplication levels
• identifying overrepresented sequences
• aggregating reports across samples

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