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bio-read-qc-contamination-screening

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Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample swap contamination. Use when suspecting cross-contamination or working with samples prone to microbial contamination.

When to use

• Detect sample contamination
• Identify cross-species reads
• Screen reads against multiple reference genomes
• Identify bacterial contamination
• Identify viral contamination
• Identify adapter sequences
• Identify sample swap contamination
• Screening FASTQ files

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