domains / families / science / bio-read-alignment-bwa-alignment

bio-read-alignment-bwa-alignment

separate

Align DNA short reads to reference genomes using bwa-mem2, the faster successor to BWA-MEM.

When to use

• Aligning DNA short reads to a reference genome
• Building reference genome index
• Paired-end read alignment
• Single-end read alignment
• Alignment with read groups
• Direct to sorted BAM
• Mark duplicates pipeline
• Split read alignment

Skill page

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