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bio-pathway-reactome

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Reactome pathway enrichment using ReactomePA package. Use when analyzing gene lists against Reactome's curated peer-reviewed pathway database. Performs over-representation analysis and GSEA with visualization and pathway hierarchy exploration.

When to use

• Reactome pathway enrichment
• over-representation analysis
• GSEA on Reactome pathways
• pathway hierarchy exploration
• visualization of enrichment results
• comparing clusters
• viewing pathways in browser

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