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single-trajectory

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Guide to reproducing OmicVerse trajectory workflows spanning PAGA, Palantir, VIA, velocity coupling, and fate scoring notebooks.

When to use

• reproducing single-trajectory analysis workflow
• PAGA trajectory inference
• Palantir pseudotime and branch probabilities
• VIA lineage progression
• RNA velocity coupling with scVelo
• downstream fate scoring notebooks
• parameter tuning for trajectory methods
• visualization and export of trajectory results

Skill page

Source