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pdb

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Fetch and analyze protein structures from RCSB PDB. Use this skill when: (1) Need to download a structure by PDB ID, (2) Search for similar structures, (3) Prepare target for binder design, (4) Extract specific chains or domains, (5) Get structure metadata. For sequence lookup, use uniprot. For binder design workflow, use binder-design.

When to use

• download a structure by PDB ID
• search for similar structures
• prepare target for binder design
• extract specific chains or domains
• get structure metadata

When not to use

• sequence lookup
• binder design workflow

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