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bionemo-proteinmpnn-nim

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Run ProteinMPNN inverse folding via NVIDIA NIM to design protein sequences for a target backbone. Sends user-provided PDB files and design parameters to NVIDIA's hosted API, authenticated with an environment API key, or to a user-selected local NIM. Use for sequence design, backbone redesign, fixed chains and residues, omit_AAs, sampling temperature, soluble model, local Docker, and multi-FASTA output.

When to use

• sequence design
• backbone redesign
• fixed chains and residues
• omit_AAs
• sampling temperature
• soluble model
• local Docker
• multi-FASTA output

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