domains / families / science / bio-population-genetics-linkage-disequilibrium

bio-population-genetics-linkage-disequilibrium

separate

Calculate linkage disequilibrium statistics (r², D'), perform LD pruning for population structure analysis, identify haplotype blocks, and visualize LD patterns using PLINK, scikit-allel, and LDBlockShow.

When to use

calculating LD
pruning variants
identifying haplotype blocks
visualizing LD patterns
LD-based clumping
LD decay analysis

Skill page

Source

Repository	Path
FreedomIntelligence/OpenClaw-Medical-Skills	`skills/bio-population-genetics-linkage-disequilibrium/SKILL.md`