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bio-pdb-structure-modification

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Modify protein structures using Biopython Bio.PDB. Use when transforming coordinates, removing atoms or residues, adding new entities, modifying B-factors and occupancies, or building structures programmatically.

When to use

• transforming coordinates
• removing atoms or residues
• adding new entities
• modifying B-factors
• modifying occupancies
• building structures programmatically
• extracting a chain from a PDB file
• renumbering residues

Skill page

Source