domains / families / science / bio-workflows-metagenomics-pipeline

bio-workflows-metagenomics-pipeline

separate

End-to-end metagenomics workflow from FASTQ to taxonomic and functional profiles. Covers Kraken2 classification, Bracken abundance estimation, and HUMAnN functional profiling.

When to use

profiling metagenomic samples
QC and host removal
taxonomic classification
Bracken abundance estimation
MetaPhlAn profiling
HUMAnN functional profiling
metagenome visualization

Skill page

Source

Repository	Path
FreedomIntelligence/OpenClaw-Medical-Skills	`skills/bio-workflows-metagenomics-pipeline/SKILL.md`