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bio-systems-biology-metabolic-reconstruction

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Build genome-scale metabolic models from genome sequences using CarveMe and gapseq for automated reconstruction. Generate draft models ready for curation and analysis.

When to use

• Build genome-scale metabolic models
• Automated reconstruction using CarveMe
• Automated reconstruction using gapseq
• Generate draft models
• Gap-fill for specific media
• Batch reconstruction for multiple genomes
• Community model construction

When not to use

• Creating metabolic models for organisms with existing models

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