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bio-workflows-metabolic-modeling-pipeline

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End-to-end genome-scale metabolic modeling from genome sequence to flux predictions. Covers automated reconstruction with CarveMe, model validation with memote, FBA/FVA analysis, and gene essentiality prediction.

When to use

• building metabolic models
• predicting metabolic phenotypes from genomic data
• automated reconstruction with CarveMe
• model validation with memote
• FBA/FVA analysis
• gene essentiality prediction
• context-specific models

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