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bio-hi-c-analysis-hic-visualization

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Visualize Hi-C contact matrices, TADs, loops, and genomic features using matplotlib, cooltools, and HiCExplorer. Create triangle plots, virtual 4C, and multi-track figures. Use when visualizing contact matrices or genomic features.

When to use

• Visualizing contact matrices
• Visualizing genomic features
• Creating triangle plots
• Creating virtual 4C profiles
• Creating multi-track figures
• Plotting TADs
• Plotting loops
• Comparing two matrices

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