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bio-hi-c-analysis-hic-data-io

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Load, convert, and manipulate Hi-C contact matrices using cooler format. Read .cool/.mcool files, convert from .hic format, access matrix data, and export to different formats. Use when loading or converting Hi-C contact matrices.

When to use

• Loading Hi-C contact matrices
• Converting Hi-C contact matrices
• Reading .cool/.mcool files
• Converting from .hic format
• Accessing matrix data
• Exporting to different formats
• Merging cooler files
• Coarsening resolution

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