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bio-geo-data

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Query NCBI Gene Expression Omnibus (GEO) for expression datasets using Biopython Bio.Entrez. Use when finding microarray/RNA-seq datasets, downloading expression data, or linking GEO series to SRA runs.

When to use

• finding microarray/RNA-seq datasets
• downloading expression data
• linking GEO series to SRA runs
• searching GEO DataSets
• searching GEO Series
• fetching GEO information
• finding RNA-Seq datasets
• getting GSE download links

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