domains / families / science / bionemo-codonfm-score

bionemo-codonfm-score

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Validate, prepare, or run public CodonFM Encodon masked-codon variant scoring and review compatibility of its scoring workflows. Use only when the user explicitly requests CodonFM or Encodon, or that context is already established in the conversation. Do not select this skill for a generic variant-scoring request without that context; ask for the variant and intended analysis first.

When to use

• CodonFM Encodon masked-codon variant scoring
• Review compatibility of scoring workflows
• Validate variant CSV inputs
• Prepare scoring commands
• Run mutation_prediction inference

When not to use

• Generic variant-scoring requests without CodonFM/Encodon context
• Clinical diagnosis
• Expression-direction prediction
• Synonymous-codon aggregation
• Decodon workflows
• Implementing missing workflows
• Searching private code

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