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bio-genome-intervals-coverage-analysis

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Calculate read depth and coverage across genomic intervals using bedtools genomecov and coverage. Generate bedGraph files, compute per-base depth, and summarize coverage statistics.

When to use

• assessing sequencing depth
• creating coverage tracks
• evaluating target capture efficiency
• generating bedGraph files
• computing per-base depth
• summarizing coverage statistics
• calculating coverage per feature
• counting reads across multiple BAMs

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