domains / families / science / bio-workflows-biomarker-pipeline

bio-workflows-biomarker-pipeline

separate

End-to-end biomarker discovery workflow from expression data to validated biomarker panels. Covers feature selection with Boruta/LASSO, classifier training with nested CV, and SHAP interpretation.

When to use

• building diagnostic biomarker signatures
• building prognostic biomarker signatures
• feature selection with Boruta
• feature selection with LASSO stability selection
• classifier training with nested CV
• SHAP interpretation
• validating biomarker panels from omics data

Skill page

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