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jupyter-reports

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Runs parameterized Jupyter notebooks as reproducible batch report generators with papermill, renders them to HTML/PDF with nbconvert, aggregates results across samples, and makes notebook outputs trustworthy. Use when generating per-sample analysis reports, executing a notebook template across many datasets, or fixing notebooks that do not reproduce.

When to use

• generating per-sample analysis reports
• executing a notebook template across many datasets
• fixing notebooks that do not reproduce
• rendering notebooks to HTML/PDF
• aggregating results across samples

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