domains / families / science / msa-statistics

msa-statistics

separate

Calculate alignment statistics including sequence identity, conservation scores, substitution matrices, and similarity metrics. Use when comparing alignment quality, measuring sequence divergence, and analyzing evolutionary patterns.

When to use

• Calculate sequence identity
• Calculate conservation scores
• Calculate substitution counts
• Calculate alignment metrics
• Compare alignment quality
• Measure sequence divergence
• Analyze evolutionary patterns

Skill page

Source