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bio-format-conversion

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Convert between sequence file formats (FASTA, FASTQ, GenBank, EMBL) using Biopython Bio.SeqIO. Use when changing file formats or preparing data for different tools.

When to use

• Convert between sequence file formats
• Changing file formats
• Preparing data for different tools
• GenBank to FASTA conversion
• FASTQ to FASTA conversion
• FASTA to GenBank conversion
• FASTA to FASTQ conversion
• Batch convert multiple files

When not to use

• SAM/BAM/CRAM conversion

Skill page

Source