domains / families / data / sequence-logos

sequence-logos

separate

Build sequence logos from aligned DNA, RNA, or protein motifs using ggseqlogo (R), Logomaker (Python), or WebLogo with explicit bits vs probability encoding, background-frequency correction, custom alphabets, and multi-logo stacking. Use when visualizing motif PWMs (TF binding, splice sites, CRISPR spacers), aligned-position composition, or comparing two motif sets.

When to use

• visualizing motif PWMs
• TF binding motifs
• splice sites
• CRISPR spacers
• aligned-position composition
• comparing two motif sets
• protein motifs
• differential motif analysis

Skill page

Source